IL_7OSA_178
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UAG*UGGG
- Length
- 7 nucleotides
- Bulged bases
- 7OSA|1|25S|G|2606
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSA_178 not in the Motif Atlas
- Homologous match to IL_8C3A_100
- Geometric discrepancy: 0.0884
- The information below is about IL_8C3A_100
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38958.10
- Basepair signature
- cWW-cWW-cWW-tHS
- Number of instances in this motif group
- 9
Unit IDs
7OSA|1|25S|U|2423
7OSA|1|25S|A|2424
7OSA|1|25S|G|2425
*
7OSA|1|25S|U|2604
7OSA|1|25S|G|2605
7OSA|1|25S|G|2606
7OSA|1|25S|G|2607
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain PSIT
- Transfer RNA; tRNA
- Chain eL15
- 60S ribosomal protein L15-A
- Chain eL42
- BJ4_G0001880.mRNA.1.CDS.1
- Chain uL2
- 60S ribosomal protein L2-B
Coloring options: