IL_7OSA_188

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUG*UUUUU

Length

8 nucleotides

Bulged bases

7OSA|1|25S|U|2860

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSA_188 not in the Motif Atlas

Homologous match to IL_8P9A_332

Geometric discrepancy: 0.1151

The information below is about IL_8P9A_332

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_51387.3

Basepair signature

cWW-cSH-cWW-cWW

Number of instances in this motif group

21

Unit IDs

7OSA|1|25S|G|2828
7OSA|1|25S|U|2829
7OSA|1|25S|G|2830
*
7OSA|1|25S|U|2858
7OSA|1|25S|U|2859
7OSA|1|25S|U|2860
7OSA|1|25S|U|2861
7OSA|1|25S|U|2862

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain uL16

60S ribosomal protein L10

Chain uL3

60S ribosomal protein L3