IL_7OSA_202

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CU*AUUG

Length

6 nucleotides

Bulged bases

7OSA|1|25S|U|3078, 7OSA|1|25S|U|3079

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSA_202 not in the Motif Atlas

Homologous match to IL_8C3A_128

Geometric discrepancy: 0.2826

The information below is about IL_8C3A_128

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_24807.2

Basepair signature

cWW-cWW

Number of instances in this motif group

16

Unit IDs

7OSA|1|25S|C|3063
7OSA|1|25S|U|3064
*
7OSA|1|25S|A|3077
7OSA|1|25S|U|3078
7OSA|1|25S|U|3079
7OSA|1|25S|G|3080

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL19

60S ribosomal protein L19-A

Chain eL31

BJ4_G0008090.mRNA.1.CDS.1