IL_7OSA_222

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CU*AAG

Length

5 nucleotides

Bulged bases

7OSA|1|AB|A|64

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSA_222 not in the Motif Atlas

Homologous match to IL_8P9A_364

Geometric discrepancy: 0.0815

The information below is about IL_8P9A_364

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.7

Basepair signature

cWW-L-cWW

Number of instances in this motif group

132

Unit IDs

7OSA|1|AB|C|15
7OSA|1|AB|U|16
*
7OSA|1|AB|A|63
7OSA|1|AB|A|64
7OSA|1|AB|G|65

Current chains

Chain AB

5S

Nearby chains

Chain 25S

Large subunit ribosomal RNA; LSU rRNA

Chain uL16

60S ribosomal protein L10

Chain uL18

60S ribosomal protein L5

Chain uL5

BJ4_G0027750.mRNA.1.CDS.1