IL_7OSA_230

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGUAUAAC*GCUAAUAC

Length

16 nucleotides

Bulged bases

7OSA|1|18S|U|144, 7OSA|1|18S|U|170

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSA_230 not in the Motif Atlas

Homologous match to IL_8P9A_383

Geometric discrepancy: 0.1421

The information below is about IL_8P9A_383

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_80604.6

Basepair signature

cWW-cWW-tWH-tWH-tHW-tHW-cWW

Number of instances in this motif group

3

Unit IDs

7OSA|1|18S|G|142
7OSA|1|18S|G|143
7OSA|1|18S|U|144
7OSA|1|18S|A|145
7OSA|1|18S|U|146
7OSA|1|18S|A|147
7OSA|1|18S|A|148
7OSA|1|18S|C|149
*
7OSA|1|18S|G|165
7OSA|1|18S|C|166
7OSA|1|18S|U|167
7OSA|1|18S|A|168
7OSA|1|18S|A|169
7OSA|1|18S|U|170
7OSA|1|18S|A|171
7OSA|1|18S|C|172

Current chains

Chain 18S

18S rRNA

Nearby chains

Chain eS24

40S ribosomal protein S24

Chain eS6

40S ribosomal protein S6