IL_7OSA_247

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGAUUCUUC*GGAAUAGUUUUC

Length

21 nucleotides

Bulged bases

7OSA|1|25S|U|1629, 7OSA|1|25S|U|1815, 7OSA|1|25S|U|1820, 7OSA|1|25S|U|1821

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OSA|1|25S|G|1623
7OSA|1|25S|G|1624
7OSA|1|25S|A|1625
7OSA|1|25S|U|1626
7OSA|1|25S|U|1627
7OSA|1|25S|C|1628
7OSA|1|25S|U|1629
7OSA|1|25S|U|1630
7OSA|1|25S|C|1631
*
7OSA|1|25S|G|1811
7OSA|1|25S|G|1812
7OSA|1|25S|A|1813
7OSA|1|25S|A|1814
7OSA|1|25S|U|1815
7OSA|1|25S|A|1816
7OSA|1|25S|G|1817
7OSA|1|25S|U|1818
7OSA|1|25S|U|1819
7OSA|1|25S|U|1820
7OSA|1|25S|U|1821
7OSA|1|25S|C|1822

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL27

60S ribosomal protein L27

Chain eL34

60S ribosomal protein L34-A

Chain eL38

BJ4_G0032190.mRNA.1.CDS.1