IL_7OSA_256

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGGU*ACGGG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSA_256 not in the Motif Atlas

Geometric match to IL_4DB2_001

Geometric discrepancy: 0.3792

The information below is about IL_4DB2_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68909.1

Basepair signature

cWW-L-R-L-R-L-cWW

Number of instances in this motif group

6

Unit IDs

7OSA|1|18S|C|646
7OSA|1|18S|G|647
7OSA|1|18S|G|648
7OSA|1|18S|U|649
*
7OSA|1|18S|A|685
7OSA|1|18S|C|686
7OSA|1|18S|G|687
7OSA|1|18S|G|688
7OSA|1|18S|G|689

Current chains

Chain 18S

18S rRNA

Nearby chains

Chain uS8

40S ribosomal protein S22-A