IL_7OSM_038
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AAAAAUU*AUAU
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSM_038 not in the Motif Atlas
- Homologous match to IL_8C3A_433
- Geometric discrepancy: 0.1649
- The information below is about IL_8C3A_433
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_83023.1
- Basepair signature
- cWW-R-L-R-L-R-L-L-L-L
- Number of instances in this motif group
- 1
Unit IDs
7OSM|1|18S|A|753
7OSM|1|18S|A|754
7OSM|1|18S|A|755
7OSM|1|18S|A|756
7OSM|1|18S|A|757
7OSM|1|18S|U|758
7OSM|1|18S|U|759
*
7OSM|1|18S|A|791
7OSM|1|18S|U|792
7OSM|1|18S|A|793
7OSM|1|18S|U|794
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain eS4
- 40S ribosomal protein S4
- Chain uS17
- 40S ribosomal protein S11-B
- Chain uS4
- BJ4_G0026100.mRNA.1.CDS.1
- Chain uS8
- 40S ribosomal protein S22-A
Coloring options: