IL_7OSM_045
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UUGUCAG*CUUGGAUUUA
- Length
- 17 nucleotides
- Bulged bases
- 7OSM|1|18S|G|913
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSM_045 not in the Motif Atlas
- Homologous match to IL_8C3A_440
- Geometric discrepancy: 0.2788
- The information below is about IL_8C3A_440
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_22252.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
7OSM|1|18S|U|893
7OSM|1|18S|U|894
7OSM|1|18S|G|895
7OSM|1|18S|U|896
7OSM|1|18S|C|897
7OSM|1|18S|A|898
7OSM|1|18S|G|899
*
7OSM|1|18S|C|910
7OSM|1|18S|U|911
7OSM|1|18S|U|912
7OSM|1|18S|G|913
7OSM|1|18S|G|914
7OSM|1|18S|A|915
7OSM|1|18S|U|916
7OSM|1|18S|U|917
7OSM|1|18S|U|918
7OSM|1|18S|A|919
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain 25S
- Large subunit ribosomal RNA; LSU rRNA
- Chain eS1
- 40S ribosomal protein S1
- Chain uL2
- 60S ribosomal protein L2-B
- Chain uS11
- 40S ribosomal protein S14-A
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