IL_7OSM_069
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GUCUAAC*GUAAUC
- Length
- 13 nucleotides
- Bulged bases
- 7OSM|1|18S|A|1516
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSM_069 not in the Motif Atlas
- Homologous match to IL_4V88_460
- Geometric discrepancy: 0.2962
- The information below is about IL_4V88_460
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_77092.1
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7OSM|1|18S|G|1488
7OSM|1|18S|U|1489
7OSM|1|18S|C|1490
7OSM|1|18S|U|1491
7OSM|1|18S|A|1492
7OSM|1|18S|A|1493
7OSM|1|18S|C|1494
*
7OSM|1|18S|G|1513
7OSM|1|18S|U|1514
7OSM|1|18S|A|1515
7OSM|1|18S|A|1516
7OSM|1|18S|U|1517
7OSM|1|18S|C|1518
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain eS19
- 40S ribosomal protein S19-A
- Chain uS10
- 40S ribosomal protein S20
- Chain uS14
- HLJ1_G0030400.mRNA.1.CDS.1
- Chain uS3
- BJ4_G0045400.mRNA.1.CDS.1
Coloring options: