IL_7OSM_094

3D structure

PDB id

7OSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUC*GC

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSM_094 not in the Motif Atlas

Geometric match to IL_4LFB_041

Geometric discrepancy: 0.2737

The information below is about IL_4LFB_041

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_90729.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

30

Unit IDs

7OSM|1|25S|G|183
7OSM|1|25S|U|184
7OSM|1|25S|C|185
*
7OSM|1|25S|G|232
7OSM|1|25S|C|233

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain 58S

5.8S ribosomal RNA; 5.8S rRNA

Chain eL37

Ribosomal protein L37

Chain uL24

60S ribosomal protein L26-A