IL_7OSM_119
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AGU*AU
- Length
- 5 nucleotides
- Bulged bases
- 7OSM|1|25S|G|984
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSM_119 not in the Motif Atlas
- Homologous match to IL_8C3A_040
- Geometric discrepancy: 0.1208
- The information below is about IL_8C3A_040
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_00225.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 49
Unit IDs
7OSM|1|25S|A|983
7OSM|1|25S|G|984
7OSM|1|25S|U|985
*
7OSM|1|25S|A|1099
7OSM|1|25S|U|1100
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain eL18
- BJ4_G0033900.mRNA.1.CDS.1
- Chain eL21
- BJ4_G0003770.mRNA.1.CDS.1
- Chain eL29
- 60S ribosomal protein L29
- Chain uL30
- 60S ribosomal protein L7-A
Coloring options: