3D structure

PDB id
7OSM (explore in PDB, NAKB, or RNA 3D Hub)
Description
Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
UUCUUC*GGAAUAG
Length
13 nucleotides
Bulged bases
7OSM|1|25S|U|1629, 7OSM|1|25S|U|1815
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OSM|1|25S|U|1626
7OSM|1|25S|U|1627
7OSM|1|25S|C|1628
7OSM|1|25S|U|1629
7OSM|1|25S|U|1630
7OSM|1|25S|C|1631
*
7OSM|1|25S|G|1811
7OSM|1|25S|G|1812
7OSM|1|25S|A|1813
7OSM|1|25S|A|1814
7OSM|1|25S|U|1815
7OSM|1|25S|A|1816
7OSM|1|25S|G|1817

Current chains

Chain 25S
25S rRNA

Nearby chains

Chain eL27
60S ribosomal protein L27

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.0657 s