IL_7OSM_156

3D structure

PDB id

7OSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AAG*CCU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSM_156 not in the Motif Atlas

Homologous match to IL_8C3A_081

Geometric discrepancy: 0.0672

The information below is about IL_8C3A_081

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_54997.8

Basepair signature

cWW-tWW-cWW

Number of instances in this motif group

8

Unit IDs

7OSM|1|25S|A|1895
7OSM|1|25S|A|1896
7OSM|1|25S|G|1897
*
7OSM|1|25S|C|2338
7OSM|1|25S|C|2339
7OSM|1|25S|U|2340

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL24

60S ribosomal protein L24-A

Chain uL14

60S ribosomal protein L23-B

Chain uL3

60S ribosomal protein L3