IL_7OSM_169

3D structure

PDB id

7OSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GC*GCAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSM_169 not in the Motif Atlas

Homologous match to IL_8C3A_094

Geometric discrepancy: 0.068

The information below is about IL_8C3A_094

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_22551.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

9

Unit IDs

7OSM|1|25S|G|2276
7OSM|1|25S|C|2277
*
7OSM|1|25S|G|2307
7OSM|1|25S|C|2308
7OSM|1|25S|A|2309
7OSM|1|25S|U|2310

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain ASIT

Transfer RNA; tRNA

Chain eL41

eL41