IL_7OSM_182
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GCU*GAU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSM_182 not in the Motif Atlas
- Geometric match to IL_5TBW_103
- Geometric discrepancy: 0.1239
- The information below is about IL_5TBW_103
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
7OSM|1|25S|G|2824
7OSM|1|25S|C|2825
7OSM|1|25S|U|2826
*
7OSM|1|25S|G|2863
7OSM|1|25S|A|2864
7OSM|1|25S|U|2865
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain eL29
- 60S ribosomal protein L29
- Chain uL16
- 60S ribosomal protein L10
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