IL_7OSM_215
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GU*AUC
- Length
- 5 nucleotides
- Bulged bases
- 7OSM|1|58S|U|90
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSM_215 not in the Motif Atlas
- Homologous match to IL_5TBW_146
- Geometric discrepancy: 0.2196
- The information below is about IL_5TBW_146
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_83039.19
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
7OSM|1|58S|G|68
7OSM|1|58S|U|69
*
7OSM|1|58S|A|89
7OSM|1|58S|U|90
7OSM|1|58S|C|91
Current chains
- Chain 58S
- 5.8S rRNA
Nearby chains
- Chain 25S
- Large subunit ribosomal RNA; LSU rRNA
- Chain eL37
- Ribosomal protein L37
- Chain eL39
- 60S ribosomal protein L39
- Chain uL24
- 60S ribosomal protein L26-A
- Chain uL29
- BJ4_G0044250.mRNA.1.CDS.1
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