3D structure

PDB id
7OSM (explore in PDB, NAKB, or RNA 3D Hub)
Description
Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
ACGUUU*AUCGU
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7OSM_225 not in the Motif Atlas
Homologous match to IL_8P9A_416
Geometric discrepancy: 0.5284
The information below is about IL_8P9A_416
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OSM|1|18S|A|817
7OSM|1|18S|C|818
7OSM|1|18S|G|819
7OSM|1|18S|U|820
7OSM|1|18S|U|821
7OSM|1|18S|U|822
*
7OSM|1|18S|A|850
7OSM|1|18S|U|851
7OSM|1|18S|C|852
7OSM|1|18S|G|853
7OSM|1|18S|U|854

Current chains

Chain 18S
18S rRNA

Nearby chains

Chain eL19
60S ribosomal protein L19-A
Chain eS7
40S ribosomal protein S7

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.4439 s
Application loaded.