IL_7OSM_236

3D structure

PDB id

7OSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGAAUGUAGC*GUAUUAUAGCC

Length

21 nucleotides

Bulged bases

7OSM|1|25S|U|534, 7OSM|1|25S|U|558

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OSM|1|25S|G|530
7OSM|1|25S|G|531
7OSM|1|25S|A|532
7OSM|1|25S|A|533
7OSM|1|25S|U|534
7OSM|1|25S|G|535
7OSM|1|25S|U|536
7OSM|1|25S|A|537
7OSM|1|25S|G|538
7OSM|1|25S|C|539
*
7OSM|1|25S|G|552
7OSM|1|25S|U|553
7OSM|1|25S|A|554
7OSM|1|25S|U|555
7OSM|1|25S|U|556
7OSM|1|25S|A|557
7OSM|1|25S|U|558
7OSM|1|25S|A|559
7OSM|1|25S|G|560
7OSM|1|25S|C|561
7OSM|1|25S|C|562

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL14

60S ribosomal protein L14-A

Chain eL20

60S ribosomal protein L20