IL_7OSM_242

3D structure

PDB id

7OSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGAUUCUUC*GGAAUAGUUUUC

Length

21 nucleotides

Bulged bases

7OSM|1|25S|U|1629, 7OSM|1|25S|U|1815, 7OSM|1|25S|U|1821

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OSM|1|25S|G|1623
7OSM|1|25S|G|1624
7OSM|1|25S|A|1625
7OSM|1|25S|U|1626
7OSM|1|25S|U|1627
7OSM|1|25S|C|1628
7OSM|1|25S|U|1629
7OSM|1|25S|U|1630
7OSM|1|25S|C|1631
*
7OSM|1|25S|G|1811
7OSM|1|25S|G|1812
7OSM|1|25S|A|1813
7OSM|1|25S|A|1814
7OSM|1|25S|U|1815
7OSM|1|25S|A|1816
7OSM|1|25S|G|1817
7OSM|1|25S|U|1818
7OSM|1|25S|U|1819
7OSM|1|25S|U|1820
7OSM|1|25S|U|1821
7OSM|1|25S|C|1822

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL27

60S ribosomal protein L27

Chain eL34

60S ribosomal protein L34-A

Chain eL38

BJ4_G0032190.mRNA.1.CDS.1