IL_7OT5_050

3D structure

PDB id

7OT5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-70 cotranslational folding intermediate 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGAAG*CUAAG

Length

10 nucleotides

Bulged bases

7OT5|1|1|A|1420

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OT5_050 not in the Motif Atlas

Homologous match to IL_7RQB_055

Geometric discrepancy: 0.113

The information below is about IL_7RQB_055

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_89002.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

20

Unit IDs

7OT5|1|1|C|1417
7OT5|1|1|G|1418
7OT5|1|1|A|1419
7OT5|1|1|A|1420
7OT5|1|1|G|1421
*
7OT5|1|1|C|1577
7OT5|1|1|U|1578
7OT5|1|1|A|1579
7OT5|1|1|A|1580
7OT5|1|1|G|1581

Current chains

Chain 1

23S rRNA

Nearby chains