IL_7OT5_134

3D structure

PDB id

7OT5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-70 cotranslational folding intermediate 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAAGGG*CAUUGAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OT5_134 not in the Motif Atlas

Homologous match to IL_5J7L_023

Geometric discrepancy: 0.1354

The information below is about IL_5J7L_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_70801.1

Basepair signature

cWW-cWW-L-R-tWW-L-R-L-cWW

Number of instances in this motif group

1

Unit IDs

7OT5|1|2|G|450
7OT5|1|2|A|451
7OT5|1|2|A|452
7OT5|1|2|G|453
7OT5|1|2|G|454
7OT5|1|2|G|455
*
7OT5|1|2|C|477
7OT5|1|2|A|478
7OT5|1|2|U|479
7OT5|1|2|U|480
7OT5|1|2|G|481
7OT5|1|2|A|482
7OT5|1|2|C|483

Current chains

Chain 2

16S rRNA

Nearby chains

Chain t

30S ribosomal protein S16