IL_7OT5_187

3D structure

PDB id

7OT5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-70 cotranslational folding intermediate 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OT5_187 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.0592

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

7OT5|1|1|U|1851
7OT5|1|1|U|1852
7OT5|1|1|A|1853
7OT5|1|1|A|1854
7OT5|1|1|U|1855
7OT5|1|1|U|1856
7OT5|1|1|G|1857
7OT5|1|1|A|1858
7OT5|1|1|U|1859
7OT5|1|1|G|1860
*
7OT5|1|1|U|1882
7OT5|1|1|U|1883
7OT5|1|1|G|1884
7OT5|1|1|A|1885
7OT5|1|1|U|1886
7OT5|1|1|C|1887
7OT5|1|1|G|1888
7OT5|1|1|A|1889
7OT5|1|1|A|1890
7OT5|1|1|G|1891

Current chains

Chain 1

23S rRNA

Nearby chains