IL_7OW7_031

3D structure

PDB id

7OW7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EIF6-bound large subunit of the human ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GCG*CCC

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OW7_031 not in the Motif Atlas

Geometric match to IL_7RQB_030

Geometric discrepancy: 0.2929

The information below is about IL_7RQB_030

Detailed Annotation

Isolated cWS basepair

Broad Annotation

No text annotation

Motif group

IL_52767.4

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

28

Unit IDs

7OW7|1|A|G|740
7OW7|1|A|C|741
7OW7|1|A|G|742
*
7OW7|1|A|C|922
7OW7|1|A|C|923
7OW7|1|A|C|924

Current chains

Chain A

28S rRNA

Nearby chains

Chain M

60S ribosomal protein L18a

Chain s

60S ribosomal protein L14