IL_7OW7_037

3D structure

PDB id

7OW7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EIF6-bound large subunit of the human ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CGAC*GGUCG

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OW7_037 not in the Motif Atlas

Geometric match to IL_6CZR_168

Geometric discrepancy: 0.2381

The information below is about IL_6CZR_168

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_67743.1

Basepair signature

cWW-cWW-cWH-cWW

Number of instances in this motif group

9

Unit IDs

7OW7|1|A|C|1093
7OW7|1|A|G|1094
7OW7|1|A|A|1095
7OW7|1|A|C|1096
*
7OW7|1|A|G|1199
7OW7|1|A|G|1200
7OW7|1|A|U|1201
7OW7|1|A|C|1202
7OW7|1|A|G|1203

Current chains

Chain A

28S rRNA

Nearby chains

Chain M

60S ribosomal protein L18a

Chain N

60S ribosomal protein L21