IL_7OW7_038

3D structure

PDB id

7OW7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EIF6-bound large subunit of the human ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GGA*UGC

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OW7_038 not in the Motif Atlas

Geometric match to IL_3W3S_003

Geometric discrepancy: 0.1051

The information below is about IL_3W3S_003

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10892.2

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

58

Unit IDs

7OW7|1|A|G|1173
7OW7|1|A|G|1174
7OW7|1|A|A|1175
*
7OW7|1|A|U|1186
7OW7|1|A|G|1187
7OW7|1|A|C|1188

Current chains

Chain A

28S rRNA

Nearby chains

Chain G

60S ribosomal protein L5