3D structure

PDB id
7OW7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
EIF6-bound large subunit of the human ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.2 Å

Loop

Sequence
CGGUAAA*UU(PSU)AAAUG
Length
15 nucleotides
Bulged bases
None detected
QA status
Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OW7|1|A|C|1732
7OW7|1|A|G|1733
7OW7|1|A|G|1734
7OW7|1|A|U|1735
7OW7|1|A|A|1736
7OW7|1|A|A|1737
7OW7|1|A|A|1738
*
7OW7|1|A|U|1790
7OW7|1|A|U|1791
7OW7|1|A|PSU|1792
7OW7|1|A|A|1793
7OW7|1|A|A|1794
7OW7|1|A|A|1795
7OW7|1|A|U|1796
7OW7|1|A|G|1797

Current chains

Chain A
28S rRNA

Nearby chains

Chain B
5S ribosomal RNA; 5S rRNA
Chain G
60S ribosomal protein L5
Chain N
60S ribosomal protein L21
Chain m
60S ribosomal protein L7
Chain p
60S ribosomal protein L10-like

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.391 s