IL_7OW7_064
3D structure
- PDB id
- 7OW7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EIF6-bound large subunit of the human ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- CGCCCGAU*GG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OW7_064 not in the Motif Atlas
- Geometric match to IL_7RQB_037
- Geometric discrepancy: 0.1126
- The information below is about IL_7RQB_037
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_15861.7
- Basepair signature
- cWW-L-cWW-L-L-R-cSH
- Number of instances in this motif group
- 12
Unit IDs
7OW7|1|A|C|1911
7OW7|1|A|G|1912
7OW7|1|A|C|1913
7OW7|1|A|C|1914
7OW7|1|A|C|1915
7OW7|1|A|G|1916
7OW7|1|A|A|1917
7OW7|1|A|U|1918
*
7OW7|1|A|G|2064
7OW7|1|A|G|2065
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain I
- 60S ribosomal protein L13a
- Chain M
- 60S ribosomal protein L18a
- Chain Z
- 60S ribosomal protein L35a
- Chain m
- 60S ribosomal protein L7
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