IL_7OW7_131

3D structure

PDB id

7OW7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EIF6-bound large subunit of the human ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

G(PSU)G*CAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OW7_131 not in the Motif Atlas

Geometric match to IL_5VCI_005

Geometric discrepancy: 0.2532

The information below is about IL_5VCI_005

Detailed Annotation

Not an internal loop

Broad Annotation

Not an internal loop

Motif group

IL_64417.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

18

Unit IDs

7OW7|1|A|G|4470
7OW7|1|A|PSU|4471
7OW7|1|A|G|4472
*
7OW7|1|A|C|4483
7OW7|1|A|A|4484
7OW7|1|A|C|4485

Current chains

Chain A

28S rRNA

Nearby chains

Chain o

60S ribosomal protein L9