IL_7OW7_138
3D structure
- PDB id
- 7OW7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EIF6-bound large subunit of the human ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- CCAU*AGGCG
- Length
- 9 nucleotides
- Bulged bases
- 7OW7|1|A|C|4720
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OW7_138 not in the Motif Atlas
- Geometric match to IL_6E7L_002
- Geometric discrepancy: 0.3507
- The information below is about IL_6E7L_002
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_69065.1
- Basepair signature
- cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
7OW7|1|A|C|4582
7OW7|1|A|C|4583
7OW7|1|A|A|4584
7OW7|1|A|U|4585
*
7OW7|1|A|A|4717
7OW7|1|A|G|4718
7OW7|1|A|G|4719
7OW7|1|A|C|4720
7OW7|1|A|G|4721
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain E
- 60S ribosomal protein L3 isoform a
- Chain I
- 60S ribosomal protein L13a
Coloring options: