3D structure

PDB id
7OW7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
EIF6-bound large subunit of the human ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.2 Å

Loop

Sequence
A(OMG)ACAU(PSU)U*ACCA(PSU)CU
Length
15 nucleotides
Bulged bases
7OW7|1|A|C|4670
QA status
Modified nucleotides: OMG, PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OW7|1|A|A|4622
7OW7|1|A|OMG|4623
7OW7|1|A|A|4624
7OW7|1|A|C|4625
7OW7|1|A|A|4626
7OW7|1|A|U|4627
7OW7|1|A|PSU|4628
7OW7|1|A|U|4629
*
7OW7|1|A|A|4669
7OW7|1|A|C|4670
7OW7|1|A|C|4671
7OW7|1|A|A|4672
7OW7|1|A|PSU|4673
7OW7|1|A|C|4674
7OW7|1|A|U|4675

Current chains

Chain A
28S rRNA

Nearby chains

Chain E
60S ribosomal protein L3 isoform a
Chain Q
60S ribosomal protein L23
Chain u
60S ribosomal protein L24

Coloring options:

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