IL_7OW7_143

3D structure

PDB id

7OW7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EIF6-bound large subunit of the human ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

UU*AAUG

Length

6 nucleotides

Bulged bases

7OW7|1|A|A|4656, 7OW7|1|A|U|4657

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OW7_143 not in the Motif Atlas

Homologous match to IL_8C3A_128

Geometric discrepancy: 0.2554

The information below is about IL_8C3A_128

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_24807.2

Basepair signature

cWW-cWW

Number of instances in this motif group

16

Unit IDs

7OW7|1|A|U|4641
7OW7|1|A|U|4642
*
7OW7|1|A|A|4655
7OW7|1|A|A|4656
7OW7|1|A|U|4657
7OW7|1|A|G|4658

Current chains

Chain A

28S rRNA

Nearby chains

Chain L

60S ribosomal protein L19

Chain X

60S ribosomal protein L31