3D structure

PDB id
7OW7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
EIF6-bound large subunit of the human ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.2 Å

Loop

Sequence
CCUCGGAUAG*UGCGGAGUG
Length
19 nucleotides
Bulged bases
7OW7|1|A|C|4757, 7OW7|1|A|U|4758, 7OW7|1|A|A|4764, 7OW7|1|A|G|4870, 7OW7|1|A|C|4871, 7OW7|1|A|G|4873, 7OW7|1|A|U|4876
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OW7|1|A|C|4756
7OW7|1|A|C|4757
7OW7|1|A|U|4758
7OW7|1|A|C|4759
7OW7|1|A|G|4760
7OW7|1|A|G|4761
7OW7|1|A|A|4762
7OW7|1|A|U|4763
7OW7|1|A|A|4764
7OW7|1|A|G|4765
*
7OW7|1|A|U|4869
7OW7|1|A|G|4870
7OW7|1|A|C|4871
7OW7|1|A|G|4872
7OW7|1|A|G|4873
7OW7|1|A|A|4874
7OW7|1|A|G|4875
7OW7|1|A|U|4876
7OW7|1|A|G|4877

Current chains

Chain A
28S rRNA

Nearby chains

Chain H
60S ribosomal protein L6
Chain I
60S ribosomal protein L13a
Chain M
60S ribosomal protein L18a
Chain o
60S ribosomal protein L9
Chain s
60S ribosomal protein L14

Coloring options:

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