IL_7OYD_149

3D structure

PDB id

7OYD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a rabbit 80S ribosome with zebrafish Dap1b

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

UCGUACG*UUGAAA

Length

13 nucleotides

Bulged bases

7OYD|1|5|G|5045

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OYD|1|5|U|5007
7OYD|1|5|C|5008
7OYD|1|5|G|5009
7OYD|1|5|U|5010
7OYD|1|5|A|5011
7OYD|1|5|C|5012
7OYD|1|5|G|5013
*
7OYD|1|5|U|5043
7OYD|1|5|U|5044
7OYD|1|5|G|5045
7OYD|1|5|A|5046
7OYD|1|5|A|5047
7OYD|1|5|A|5048

Current chains

Chain 5

28S rRNA

Nearby chains

Chain B

uL3

Chain W

eL24

Chain d

eL31