IL_7OYD_262
3D structure
- PDB id
- 7OYD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a rabbit 80S ribosome with zebrafish Dap1b
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- CGGUAA*UAAAU(E7G)
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: E7G
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OYD|1|5|C|1736
7OYD|1|5|G|1737
7OYD|1|5|G|1738
7OYD|1|5|U|1739
7OYD|1|5|A|1740
7OYD|1|5|A|1741
*
7OYD|1|5|U|1796
7OYD|1|5|A|1797
7OYD|1|5|A|1798
7OYD|1|5|A|1799
7OYD|1|5|U|1800
7OYD|1|5|E7G|1801
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain D
- 60S ribosomal protein L5
- Chain F
- uL30
- Chain I
- 60S ribosomal protein L10
- Chain K
- 5S ribosomal RNA; 5S rRNA
- Chain S
- RPL18A
- Chain T
- eL21
Coloring options: