IL_7P2E_044

3D structure

PDB id

7P2E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome small subunit in complex with IF3, GMPPMP and streptomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

ACUU*AUUU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P2E_044 not in the Motif Atlas

Geometric match to IL_5TBW_128

Geometric discrepancy: 0.1528

The information below is about IL_5TBW_128

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_67085.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

55

Unit IDs

7P2E|1|A|A|1507
7P2E|1|A|C|1508
7P2E|1|A|U|1509
7P2E|1|A|U|1510
*
7P2E|1|A|A|1540
7P2E|1|A|U|1541
7P2E|1|A|U|1542
7P2E|1|A|U|1543

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 0

28S ribosomal protein S34, mitochondrial

Chain 3

Aurora kinase A-interacting protein