IL_7P3K_017

3D structure

PDB id

7P3K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

ACAAU*AU

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P3K_017 not in the Motif Atlas

Geometric match to IL_5J7L_018

Geometric discrepancy: 0.0909

The information below is about IL_5J7L_018

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_03109.3

Basepair signature

cWW-cWS-tWH-cWW-L

Number of instances in this motif group

6

Unit IDs

7P3K|1|A|A|371
7P3K|1|A|C|372
7P3K|1|A|A|373
7P3K|1|A|A|374
7P3K|1|A|U|375
*
7P3K|1|A|A|389
7P3K|1|A|U|390

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S16