IL_7P3K_045

3D structure

PDB id

7P3K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCUGCAU*AUG(2MG)C

Length

12 nucleotides

Bulged bases

7P3K|1|A|C|1054

QA status

Modified nucleotides: 2MG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P3K_045 not in the Motif Atlas

Geometric match to IL_4V88_422

Geometric discrepancy: 0.3466

The information below is about IL_4V88_422

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05145.3

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

13

Unit IDs

7P3K|1|A|G|1050
7P3K|1|A|C|1051
7P3K|1|A|U|1052
7P3K|1|A|G|1053
7P3K|1|A|C|1054
7P3K|1|A|A|1055
7P3K|1|A|U|1056
*
7P3K|1|A|A|1204
7P3K|1|A|U|1205
7P3K|1|A|G|1206
7P3K|1|A|2MG|1207
7P3K|1|A|C|1208

Current chains

Chain A

16S rRNA

Nearby chains

Chain C

30S ribosomal protein S3

Chain J

30S ribosomal protein S10

Chain N

30S ribosomal protein S14