IL_7P3K_157

3D structure

PDB id

7P3K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAAC*G(PSU)(PSU)C

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P3K_157 not in the Motif Atlas

Geometric match to IL_6AZ4_001

Geometric discrepancy: 0.3626

The information below is about IL_6AZ4_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69145.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

5

Unit IDs

7P3K|1|a|G|2588
7P3K|1|a|A|2589
7P3K|1|a|A|2590
7P3K|1|a|C|2591
*
7P3K|1|a|G|2603
7P3K|1|a|PSU|2604
7P3K|1|a|PSU|2605
7P3K|1|a|C|2606

Current chains

Chain a

23S rRNA

Nearby chains

Chain V

Transfer RNA; tRNA

Chain c

50S ribosomal protein L2