IL_7P48_048

3D structure

PDB id

7P48 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus ribosome in complex with Sal(B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AUAG*UGAUU

Length

9 nucleotides

Bulged bases

7P48|1|A|U|1601

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P48_048 not in the Motif Atlas

Homologous match to IL_7RQB_057

Geometric discrepancy: 0.1141

The information below is about IL_7RQB_057

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

7P48|1|A|A|1481
7P48|1|A|U|1482
7P48|1|A|A|1483
7P48|1|A|G|1484
*
7P48|1|A|U|1598
7P48|1|A|G|1599
7P48|1|A|A|1600
7P48|1|A|U|1601
7P48|1|A|U|1602

Current chains

Chain A

23S rRNA

Nearby chains