IL_7P48_049

3D structure

PDB id

7P48 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus ribosome in complex with Sal(B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UAAG*UGAUG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P48_049 not in the Motif Atlas

Homologous match to IL_5J7L_299

Geometric discrepancy: 0.407

The information below is about IL_5J7L_299

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68574.4

Basepair signature

cWW-tHH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

7P48|1|A|U|1512
7P48|1|A|A|1513
7P48|1|A|A|1514
7P48|1|A|G|1515
*
7P48|1|A|U|1565
7P48|1|A|G|1566
7P48|1|A|A|1567
7P48|1|A|U|1568
7P48|1|A|G|1569

Current chains

Chain A

23S rRNA

Nearby chains