IL_7P48_148
3D structure
- PDB id
- 7P48 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus ribosome in complex with Sal(B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUGC*GAGGAAG
- Length
- 11 nucleotides
- Bulged bases
- 7P48|1|a|U|1169
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7P48_148 not in the Motif Atlas
- Homologous match to IL_4LFB_050
- Geometric discrepancy: 0.3574
- The information below is about IL_4LFB_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_32376.2
- Basepair signature
- cWW-cSH-cWW-tWH-L-cWW-L-L
- Number of instances in this motif group
- 3
Unit IDs
7P48|1|a|C|1168
7P48|1|a|U|1169
7P48|1|a|G|1170
7P48|1|a|C|1171
*
7P48|1|a|G|1185
7P48|1|a|A|1186
7P48|1|a|G|1187
7P48|1|a|G|1188
7P48|1|a|A|1189
7P48|1|a|A|1190
7P48|1|a|G|1191
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain b
- 30S ribosomal protein S2
- Chain i
- 30S ribosomal protein S9
Coloring options: