IL_7P48_160
3D structure
- PDB id
- 7P48 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus ribosome in complex with Sal(B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CCGAAG*CGAAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7P48_160 not in the Motif Atlas
- Geometric match to IL_4V9F_018
- Geometric discrepancy: 0.2903
- The information below is about IL_4V9F_018
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_51313.1
- Basepair signature
- cWW-L-R-L-R-L-tHS-cWW
- Number of instances in this motif group
- 1
Unit IDs
7P48|1|a|C|1440
7P48|1|a|C|1441
7P48|1|a|G|1442
7P48|1|a|A|1443
7P48|1|a|A|1444
7P48|1|a|G|1445
*
7P48|1|a|C|1477
7P48|1|a|G|1478
7P48|1|a|A|1479
7P48|1|a|A|1480
7P48|1|a|G|1481
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain I
- 50S ribosomal protein L14
- Chain N
- 50S ribosomal protein L19
- Chain t
- 30S ribosomal protein S20
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