IL_7P7Q_040
3D structure
- PDB id
- 7P7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- UCCCAAAA*UA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7P7Q_040 not in the Motif Atlas
- Homologous match to IL_5J7L_278
- Geometric discrepancy: 0.0822
- The information below is about IL_5J7L_278
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_41203.4
- Basepair signature
- cWW-L-cWW-L-L-R-cSH
- Number of instances in this motif group
- 11
Unit IDs
7P7Q|1|A|U|1043
7P7Q|1|A|C|1044
7P7Q|1|A|C|1045
7P7Q|1|A|C|1046
7P7Q|1|A|A|1047
7P7Q|1|A|A|1048
7P7Q|1|A|A|1049
7P7Q|1|A|A|1050
*
7P7Q|1|A|U|1189
7P7Q|1|A|A|1190
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain M
- 50S ribosomal protein L13
- Chain T
- 50S ribosomal protein L20
Coloring options: