IL_7P7Q_046

3D structure

PDB id

7P7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GUUG*CACC

Length

8 nucleotides

Bulged bases

7P7Q|1|A|U|1100

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P7Q_046 not in the Motif Atlas

Geometric match to IL_5D8H_002

Geometric discrepancy: 0.2694

The information below is about IL_5D8H_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28482.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

4

Unit IDs

7P7Q|1|A|G|1098
7P7Q|1|A|U|1099
7P7Q|1|A|U|1100
7P7Q|1|A|G|1101
*
7P7Q|1|A|C|1115
7P7Q|1|A|A|1116
7P7Q|1|A|C|1117
7P7Q|1|A|C|1118

Current chains

Chain A

23S rRNA

Nearby chains