IL_7P7Q_061

3D structure

PDB id

7P7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CAAG*UGACG

Length

9 nucleotides

Bulged bases

7P7Q|1|A|C|1566

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P7Q_061 not in the Motif Atlas

Homologous match to IL_5J7L_299

Geometric discrepancy: 0.1861

The information below is about IL_5J7L_299

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68574.4

Basepair signature

cWW-tHH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

7P7Q|1|A|C|1510
7P7Q|1|A|A|1511
7P7Q|1|A|A|1512
7P7Q|1|A|G|1513
*
7P7Q|1|A|U|1563
7P7Q|1|A|G|1564
7P7Q|1|A|A|1565
7P7Q|1|A|C|1566
7P7Q|1|A|G|1567

Current chains

Chain A

23S rRNA

Nearby chains