IL_7P7Q_062

3D structure

PDB id

7P7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UGAG*CAAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P7Q_062 not in the Motif Atlas

Geometric match to IL_4LFB_060

Geometric discrepancy: 0.1562

The information below is about IL_4LFB_060

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_58355.3

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

47

Unit IDs

7P7Q|1|A|U|1517
7P7Q|1|A|G|1518
7P7Q|1|A|A|1519
7P7Q|1|A|G|1520
*
7P7Q|1|A|C|1556
7P7Q|1|A|A|1557
7P7Q|1|A|A|1558
7P7Q|1|A|G|1559

Current chains

Chain A

23S rRNA

Nearby chains