IL_7P7Q_089
3D structure
- PDB id
- 7P7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GGAG*CGCUGGUGGGAUAC
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7P7Q_089 not in the Motif Atlas
- Homologous match to IL_3U4M_003
- Geometric discrepancy: 0.1878
- The information below is about IL_3U4M_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_75283.2
- Basepair signature
- cWW-tSS-L-R-L-tHS-L-cWW-L-tWH-tWH-L-L-R
- Number of instances in this motif group
- 3
Unit IDs
7P7Q|1|A|G|2137
7P7Q|1|A|G|2138
7P7Q|1|A|A|2139
7P7Q|1|A|G|2140
*
7P7Q|1|A|C|2174
7P7Q|1|A|G|2175
7P7Q|1|A|C|2176
7P7Q|1|A|U|2177
7P7Q|1|A|G|2178
7P7Q|1|A|G|2179
7P7Q|1|A|U|2180
7P7Q|1|A|G|2181
7P7Q|1|A|G|2182
7P7Q|1|A|G|2183
7P7Q|1|A|A|2184
7P7Q|1|A|U|2185
7P7Q|1|A|A|2186
7P7Q|1|A|C|2187
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 0
- ARE-ABC-F family resistance factor PoxtA
- Chain F
- 50S ribosomal protein L1
Coloring options: