IL_7P7Q_106
3D structure
- PDB id
- 7P7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- UUAGUAC*GGACCG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7P7Q_106 not in the Motif Atlas
- Geometric match to IL_7A0S_094
- Geometric discrepancy: 0.0834
- The information below is about IL_7A0S_094
- Detailed Annotation
- Sarcin-Ricin target in LSU H95; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_16458.6
- Basepair signature
- cWW-L-R-L-R-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
7P7Q|1|A|U|2665
7P7Q|1|A|U|2666
7P7Q|1|A|A|2667
7P7Q|1|A|G|2668
7P7Q|1|A|U|2669
7P7Q|1|A|A|2670
7P7Q|1|A|C|2671
*
7P7Q|1|A|G|2676
7P7Q|1|A|G|2677
7P7Q|1|A|A|2678
7P7Q|1|A|C|2679
7P7Q|1|A|C|2680
7P7Q|1|A|G|2681
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain K
- 50S ribosomal protein L6
Coloring options: