IL_7P7Q_153
3D structure
- PDB id
- 7P7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GGAGUACG*UGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7P7Q_153 not in the Motif Atlas
- Homologous match to IL_4LFB_034
- Geometric discrepancy: 0.0682
- The information below is about IL_4LFB_034
- Detailed Annotation
- 8x6 Sarcin-Ricin with inserted Y; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_84044.2
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW-L
- Number of instances in this motif group
- 6
Unit IDs
7P7Q|1|a|G|914
7P7Q|1|a|G|915
7P7Q|1|a|A|916
7P7Q|1|a|G|917
7P7Q|1|a|U|918
7P7Q|1|a|A|919
7P7Q|1|a|C|920
7P7Q|1|a|G|921
*
7P7Q|1|a|U|932
7P7Q|1|a|G|933
7P7Q|1|a|A|934
7P7Q|1|a|A|935
7P7Q|1|a|A|936
7P7Q|1|a|C|937
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain m
- 30S ribosomal protein S12
Coloring options: